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Creators/Authors contains: "Madison, M"

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  1. Free, publicly-accessible full text available December 1, 2026
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  4. Substituting the central proline residue in a collagen mimetic peptide with δ-oxaproline affords a faster-folding analogue with equivalent triple helix stability. 
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    Free, publicly-accessible full text available March 26, 2026
  5. Collagen, the major structural protein in connective tissue, adopts a right‐handed triple helix composed of peptide chains featuring repeating Gly‐Xaa‐Yaa tripeptide motifs. While the cyclic residues proline (Pro) and hydroxyproline (Hyp) are prevalent in the Xaa and Yaa positions due to their PPII‐favoring conformational properties, diverse acyclic peptoid (N‐alkylated Gly) residues can also stabilize the collagen fold. Here, we investigated the effects of N‐aminoglycine (aGly) derivatives—so‐called “azapeptoid” residues—on the thermal stability of collagen mimetic peptides (CMPs). Substitution of Pro at the central Xaa11 position with aGly resulted in destabilization of the triple helix, yet the introduction of select N′‐alkyl groups (isopropyl, butyl) partially restored thermal stability. Moreover, the N‐amino group of azapeptoid residues enhanced thermal CMP stability relative to an unsubstituted Gly analog. Kinetic studies revealed that the introduction of the hydrazide bonds in aGly and (iPr)aGly CMPs did not significantly impact triple helix refolding rates. Their modular late‐stage derivatization and tunable properties highlight azapeptoid residues as potentially valuable tools for engineering CMPs and probing the structural determinants of collagen folding. 
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    Free, publicly-accessible full text available September 1, 2026
  6. Thioredoxin/glutathione reductase from Schistosoma mansoni (SmTGR) is a multifunctional enzyme that catalyzes the reduction of glutathione (GSSG) and thioredoxin, as well as the deglutathionylation of peptide and non-peptide substrates. SmTGR structurally resembles known glutathione reductases (GR) and thioredoxin reductases (TrxR) but with an appended N-terminal domain that has a typical glutaredoxin (Grx) fold. Despite structural homology with known GRs, the site of GSSG reduction has frequently been reported as the Grx domain, based primarily on aerobic, steady-state kinetic measurements and x-ray crystallography. Here, we present an anaerobic characterization of a series of variant SmTGRs to establish the site of GSSG reduction as the cysteine pair most proximal to the FAD, Cys154/Cys159, equivalent to the site of GSSG reduction in GRs. Anaerobic steady-state analysis of U597C, U597S, U597C + C31S, and I592STOP SmTGR demonstrate that the Grx domain is not involved in the catalytic reduction of GSSG, as redox silencing of the C-terminus results in no modulation of the observed turnover number (∼0.025 s−1) and redox silencing of the Grx domain results in an increased observed turnover number (∼0.08 s−1). Transient-state single turnover analysis of these variants corroborates this, as the slowest rate observed titrates hyperbolically with GSSG concentration and approaches a limit that coincides with the respective steady-state turnover number for each variant. Numerical integration fitting of the transient state data can only account for the observed trends when competitive binding of the C-terminus is included, indicating that the partitioning of electrons to either substrate occurs at the Cys154/Cys159 disulfide rather than the previously proposed Cys596/Sec597 sulfide/selenide. Paradoxically, truncating the C-terminus at Ile592 results in a loss of GR activity, indicating a crucial non-redox role for the C-terminus. 
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  7. Jin, Jian-Ping; Forman, Henry (Ed.)
    Flavin disulfide reductases (FDRs) are FAD-dependent enzymes that transmit electrons from NAD(P)H to reduce specific oxidant substrate disulfides. These enzymes have been studied extensively, most particularly the paradigm examples: glutathione reductase and thioredoxin reductase. The common, though not universal, traits of the family include a tyrosine- or phenylalanine-gated binding pocket for NAD(P) nicotinamides adjacent to the FAD isoalloxazine re-face, and a disulfide stacked against the si-face of the isoalloxazine whose dithiol form is activated for subsequent exchange reactions by a nearby histidine acting as a base. This arrangement promotes transduction of the reducing equivalents for disulfide exchange relay reactions. From an observational standpoint the proximal parallel stacking of three redox moieties induces up to three opportunities for unique charge transfer interactions (NAD(P)H FAD, NAD(P)+•FADH2, and FAD•thiolate). In transient state, the charge transfer transitions provide discrete signals to assign reaction sequences. This review summarizes the lineage of observations for the FDR enzymes that have been extensively studied. Where applicable and in order to chart a consistent interpretation of the record, only data derived from studies that used anaerobic methods are cited. These data reveal a recurring theme for catalysis that is elaborated with specific additional functionalities for each oxidant substrate. 
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